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02/28: gnu: bwa-pssm: Fetch from git.
From: |
Ricardo Wurmus |
Subject: |
02/28: gnu: bwa-pssm: Fetch from git. |
Date: |
Sun, 21 Oct 2018 17:06:57 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 1d18ee6dfd99d9945a0e8eae7557250a1bdc6306
Author: Ricardo Wurmus <address@hidden>
Date: Sun Oct 21 12:00:41 2018 +0200
gnu: bwa-pssm: Fetch from git.
* gnu/packages/bioinformatics.scm (bwa-pssm)[source]: Fetch from git.
---
gnu/packages/bioinformatics.scm | 11 ++++++-----
1 file changed, 6 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 0dc81c8..593b5b6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1449,13 +1449,14 @@ and more accurate. BWA-MEM also has better performance
than BWA-backtrack for
(name "bwa-pssm")
(version "0.5.11")
(source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/pkerpedjiev/bwa-pssm/"
- "archive/" version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/pkerpedjiev/bwa-pssm.git")
+ (commit version)))
+ (file-name (git-file-name name version))
(sha256
(base32
- "02p7mpbs4mlxmn84g2x4ghak638vbj4lqix2ipx5g84pz9bhdavg"))))
+ "076c4q0cdqz8jgylb067y9zmvxglppnzi3qiscn0xiypgc6lgb5r"))))
(build-system gnu-build-system)
(inputs
`(("gdsl" ,gdsl)
- 15/28: gnu: Add texlive-latex-doi., (continued)
- 15/28: gnu: Add texlive-latex-doi., Ricardo Wurmus, 2018/10/21
- 10/28: gnu: python-dendropy: Fetch from git., Ricardo Wurmus, 2018/10/21
- 09/28: gnu: python-py2bit: Update to 0.3.0., Ricardo Wurmus, 2018/10/21
- 21/28: gnu: eigensoft: Update to 7.2.1., Ricardo Wurmus, 2018/10/21
- 13/28: gnu: delly: Update to 0.7.9., Ricardo Wurmus, 2018/10/21
- 12/28: gnu: deeptools: Update to 3.1.3., Ricardo Wurmus, 2018/10/21
- 08/28: gnu: cutadapt: Update to 1.18., Ricardo Wurmus, 2018/10/21
- 06/28: gnu: crossmap: Update to 0.2.9., Ricardo Wurmus, 2018/10/21
- 04/28: gnu: Add python-bx-python., Ricardo Wurmus, 2018/10/21
- 07/28: gnu: Add python-dnaio., Ricardo Wurmus, 2018/10/21
- 02/28: gnu: bwa-pssm: Fetch from git.,
Ricardo Wurmus <=
- 05/28: gnu: python-twobitreader: Update to 3.1.6., Ricardo Wurmus, 2018/10/21
- 03/28: gnu: python2-bx-python: Update to 0.8.2., Ricardo Wurmus, 2018/10/21
- 01/28: gnu: tophat: Update to 2.1.1., Ricardo Wurmus, 2018/10/21