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34/45: gnu: r-stringdb: Add missing input and disable tests.


From: guix-commits
Subject: 34/45: gnu: r-stringdb: Add missing input and disable tests.
Date: Wed, 27 Nov 2024 11:07:22 -0500 (EST)

rekado pushed a commit to branch r-team
in repository guix.

commit bbb6cb993ba5778563447dbe377f6102128387fa
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Wed Nov 27 16:12:44 2024 +0100

    gnu: r-stringdb: Add missing input and disable tests.
    
    * gnu/packages/bioconductor.scm (r-stringdb)[arguments]: Disable tests.
    [native-inputs]: Add r-biocgenerics.
    
    Change-Id: I534f7102e4397111bba7c58353ba5fc74c8bd2cf
---
 gnu/packages/bioconductor.scm | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 96c91de376..fdebd91fcd 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -13062,6 +13062,8 @@ Biology at
         (base32 "118n30lq01xp7irdxffc5hmym7wini8pfsk2xszh8lwf9ii0l5z9"))))
     (properties `((upstream-name . "STRINGdb")))
     (build-system r-build-system)
+    ;; Tests attempt to connect to string-db.org website.
+    (arguments (list #:tests? #false))
     (propagated-inputs
      (list r-gplots
            r-hash
@@ -13072,7 +13074,7 @@ Biology at
            r-png
            r-rcolorbrewer
            r-sqldf))
-    (native-inputs (list r-runit))
+    (native-inputs (list r-biocgenerics r-runit))
     (home-page "https://git.bioconductor.org/packages/STRINGdb";)
     (synopsis "Search tool for the retrieval of interacting proteins database")
     (description



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