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Re: [igraph] igraph in R: graphml support disabled


From: Prithwiraj MUKHERJEE
Subject: Re: [igraph] igraph in R: graphml support disabled
Date: Sat, 19 Mar 2011 16:04:04 +0100

Hi Gabor

I installed libxml2-dev and reinstalled igraph.
The version is igraph_0.5.5-1, but the graphml support is still not there.
I have the same version of igraph (0.5.5-1) on another machine, but compiled on R 2.9.
I copied that directory (/igraph/) into my new machine and replaced the version I have, and the code runs, but with the warning that it is compiled on a previous version of R.

I am quoting the version name from the file /igraph/html/00Index.html


Also, I dont know if this is relevant, but the latest repository URL I used was
http://software.rc.fas.harvard.edu/mirrors/R/src/contrib/igraph_0.5.5-1.tar.gz

Other CRAN repositories are also indicating the same version.

Regards
Prithwiraj


On Sat, Mar 19, 2011 at 3:36 PM, Gábor Csárdi <address@hidden> wrote:
Then most probably you don't have the libxml2-dev package installed.
Install this Ubuntu package, and then install igraph from R again. I
don't know rgedit, but probably there is nothing wrong with it. If it
still does not work, then install igraph by typing in the following
into R:

install.packages("igraph")

I hope this helps, tell us if not.

Best,
GAbor

On Sat, Mar 19, 2011 at 10:31 AM, Prithwiraj MUKHERJEE
<address@hidden> wrote:
> Hi Gabor
>
> Sorry for the incomplete details.
> I use the gedit plugin called "rgedit" to run R, and used its package
> management wizard to upgrade.
> I am not sure what version it upgraded to, but I said it is the latest
> version because no further upgrades are available.
>
> My igraph directory is: ~/R/i486-pc-linux-gnu-library/2.10/igraph
>
> Could you tell me where in this directory I can find the version number?
>
> Regards
> Prithwiraj
>
>
> I use Ubuntu 10.04, 64 bit.
>
> On Sat, Mar 19, 2011 at 3:19 PM, Gábor Csárdi <address@hidden> wrote:
>>
>> Hi,
>>
>> what exactly do you mean by the "latest" igraph? 0.5.x? 0.6?
>>
>> How did you upgrade? From source? From Ubuntu/Debian/Fedora/etc. packages?
>>
>> Sorry, but without this information we cannot know what is causing your
>> problem.
>>
>> Gabor
>>
>> On Sat, Mar 19, 2011 at 10:16 AM, Prithwiraj MUKHERJEE
>> <address@hidden> wrote:
>> > Hello
>> >
>> > I have recently upgraded to the latest igraph on linux, but my code
>> > refuses
>> > to run because graphml support seems to be disabled.
>> > It worked fine before the upgrade.
>> >
>> > Is there a workaround?
>> >
>> > Regards
>> > Prithwiraj
>> >
>> > _______________________________________________
>> > igraph-help mailing list
>> > address@hidden
>> > http://lists.nongnu.org/mailman/listinfo/igraph-help
>> >
>> >
>>
>>
>>
>> --
>> Gabor Csardi <address@hidden>     UNIL DGM
>
>



--
Gabor Csardi <address@hidden>     UNIL DGM


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