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[Myexperiment-discuss] non-taverna workflows


From: Jan Aerts
Subject: [Myexperiment-discuss] non-taverna workflows
Date: Wed, 23 Jul 2008 14:40:57 +0100

All,

Is it possible/advised to put non-taverna workflows on MyExperiment?
Michael Barton has blogged about using rakefiles (the ruby equivalent
of makefiles) on
http://www.bioinformaticszen.com/2008/05/organised-bioinformatics-experiments/.
I have used that approach a lot and believe it is a very good
alternative for doing scientific workflows where it is impossible or
not advisable to use webservices for the steps of the process.

Michael has put one of his workflows online on github:
http://github.com/michaelbarton/cost_in_evolution

Or is MyExperiment.org too much tied in with Taverna?

jan. (saaientist.blogspot.com)




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