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25/54: gnu: r-complexheatmap: Move to (gnu packages bioconductor).
From: |
guix-commits |
Subject: |
25/54: gnu: r-complexheatmap: Move to (gnu packages bioconductor). |
Date: |
Mon, 31 May 2021 10:03:11 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit ff65fa90d268bbe3f868be4cb5d9e2bb5ab6c3dd
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri May 21 22:25:57 2021 +0200
gnu: r-complexheatmap: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-complexheatmap): Move from here...
* gnu/packages/bioconductor.scm (r-complexheatmap): ...to here.
---
gnu/packages/bioconductor.scm | 39 +++++++++++++++++++++++++++++++++++++++
gnu/packages/bioinformatics.scm | 39 ---------------------------------------
2 files changed, 39 insertions(+), 39 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a0ee8a8..3e536e0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2287,6 +2287,45 @@ genome data packages and support for efficient SNP
representation.")
analysis.")
(license license:artistic2.0)))
+(define-public r-complexheatmap
+ (package
+ (name "r-complexheatmap")
+ (version "2.6.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ComplexHeatmap" version))
+ (sha256
+ (base32
+ "1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x"))))
+ (properties
+ `((upstream-name . "ComplexHeatmap")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-cairo" ,r-cairo)
+ ("r-circlize" ,r-circlize)
+ ("r-clue" ,r-clue)
+ ("r-colorspace" ,r-colorspace)
+ ("r-digest" ,r-digest)
+ ("r-getoptlong" ,r-getoptlong)
+ ("r-globaloptions" ,r-globaloptions)
+ ("r-iranges" ,r-iranges)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-png" ,r-png)
+ ("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-s4vectors" ,r-s4vectors)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page
+ "https://github.com/jokergoo/ComplexHeatmap")
+ (synopsis "Making Complex Heatmaps")
+ (description
+ "Complex heatmaps are efficient to visualize associations between
+different sources of data sets and reveal potential structures. This package
+provides a highly flexible way to arrange multiple heatmaps and supports
+self-defined annotation graphics.")
+ (license license:gpl2+)))
+
(define-public r-deseq
(package
(name "r-deseq")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a857c1c..a57c420 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9202,45 +9202,6 @@ distributed by file or by range. User defined mapper
and reducer functions
provide added flexibility for data combination and manipulation.")
(license license:artistic2.0)))
-(define-public r-complexheatmap
- (package
- (name "r-complexheatmap")
- (version "2.6.2")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "ComplexHeatmap" version))
- (sha256
- (base32
- "1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x"))))
- (properties
- `((upstream-name . "ComplexHeatmap")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-cairo" ,r-cairo)
- ("r-circlize" ,r-circlize)
- ("r-clue" ,r-clue)
- ("r-colorspace" ,r-colorspace)
- ("r-digest" ,r-digest)
- ("r-getoptlong" ,r-getoptlong)
- ("r-globaloptions" ,r-globaloptions)
- ("r-iranges" ,r-iranges)
- ("r-matrixstats" ,r-matrixstats)
- ("r-png" ,r-png)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-s4vectors" ,r-s4vectors)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (home-page
- "https://github.com/jokergoo/ComplexHeatmap")
- (synopsis "Making Complex Heatmaps")
- (description
- "Complex heatmaps are efficient to visualize associations between
-different sources of data sets and reveal potential structures. This package
-provides a highly flexible way to arrange multiple heatmaps and supports
-self-defined annotation graphics.")
- (license license:gpl2+)))
-
(define-public r-dirichletmultinomial
(package
(name "r-dirichletmultinomial")
- 05/54: gnu: r-bsgenome: Move to (gnu packages bioconductor)., (continued)
- 05/54: gnu: r-bsgenome: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 03/54: gnu: r-genomicfeatures: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 01/54: gnu: r-genomicalignments: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 12/54: gnu: r-genomation: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 10/54: gnu: r-seqpattern: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 15/54: gnu: r-mzid: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 18/54: gnu: r-edaseq: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 17/54: gnu: r-deseq: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 29/54: gnu: r-affyio: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 21/54: gnu: r-fastseg: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 25/54: gnu: r-complexheatmap: Move to (gnu packages bioconductor).,
guix-commits <=
- 20/54: gnu: r-annotationhub: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 22/54: gnu: r-affy: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 32/54: gnu: r-ensembldb: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 33/54: gnu: r-mzr: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 34/54: gnu: r-protgenerics: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 43/54: gnu: r-tximport: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 28/54: gnu: r-organismdbi: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 42/54: gnu: r-mutationalpatterns: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 46/54: gnu: r-rhdf5: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 48/54: gnu: r-copyhelper: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31