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34/54: gnu: r-protgenerics: Move to (gnu packages bioconductor).
From: |
guix-commits |
Subject: |
34/54: gnu: r-protgenerics: Move to (gnu packages bioconductor). |
Date: |
Mon, 31 May 2021 10:03:14 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 900ef8fb1ea8a85966a1a81ea01a9f3670fc8c58
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri May 21 22:26:06 2021 +0200
gnu: r-protgenerics: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-protgenerics): Move from here...
* gnu/packages/bioconductor.scm (r-protgenerics): ...to here.
---
gnu/packages/bioconductor.scm | 20 ++++++++++++++++++++
gnu/packages/bioinformatics.scm | 20 --------------------
2 files changed, 20 insertions(+), 20 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 08d4545..8e01826 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3380,6 +3380,26 @@ the results is also provided. All PCA methods make use
of the same data
structure (pcaRes) to provide a common interface to the PCA results.")
(license license:gpl3+)))
+(define-public r-protgenerics
+ (package
+ (name "r-protgenerics")
+ (version "1.22.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ProtGenerics" version))
+ (sha256
+ (base32
+ "0yihxphgkshvfv1sn67wc4zvr2zlzws2j7ki3zabm6vyfkfdkfiz"))))
+ (properties `((upstream-name . "ProtGenerics")))
+ (build-system r-build-system)
+ (home-page "https://github.com/lgatto/ProtGenerics")
+ (synopsis "S4 generic functions for proteomics infrastructure")
+ (description
+ "This package provides S4 generic functions needed by Bioconductor
+proteomics packages.")
+ (license license:artistic2.0)))
+
(define-public r-rbgl
(package
(name "r-rbgl")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b356a76..ca09528 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9027,26 +9027,6 @@ for analyzing gene-level association tests in
meta-analyses for binary
trait.")
(license license:gpl3)))
-(define-public r-protgenerics
- (package
- (name "r-protgenerics")
- (version "1.22.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "ProtGenerics" version))
- (sha256
- (base32
- "0yihxphgkshvfv1sn67wc4zvr2zlzws2j7ki3zabm6vyfkfdkfiz"))))
- (properties `((upstream-name . "ProtGenerics")))
- (build-system r-build-system)
- (home-page "https://github.com/lgatto/ProtGenerics")
- (synopsis "S4 generic functions for proteomics infrastructure")
- (description
- "This package provides S4 generic functions needed by Bioconductor
-proteomics packages.")
- (license license:artistic2.0)))
-
(define-public r-dropbead
(let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
(revision "2"))
- 15/54: gnu: r-mzid: Move to (gnu packages bioconductor)., (continued)
- 15/54: gnu: r-mzid: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 18/54: gnu: r-edaseq: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 17/54: gnu: r-deseq: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 29/54: gnu: r-affyio: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 21/54: gnu: r-fastseg: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 25/54: gnu: r-complexheatmap: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 20/54: gnu: r-annotationhub: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 22/54: gnu: r-affy: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 32/54: gnu: r-ensembldb: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 33/54: gnu: r-mzr: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 34/54: gnu: r-protgenerics: Move to (gnu packages bioconductor).,
guix-commits <=
- 43/54: gnu: r-tximport: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 28/54: gnu: r-organismdbi: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 42/54: gnu: r-mutationalpatterns: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 46/54: gnu: r-rhdf5: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 48/54: gnu: r-copyhelper: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 51/54: gnu: r-phantompeakqualtools: Let-bind commit, set revision to 1., guix-commits, 2021/05/31
- 24/54: gnu: r-gage: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 26/54: gnu: r-genomicfiles: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 27/54: gnu: r-dirichletmultinomial: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 31/54: gnu: r-biovizbase: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31