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23/54: gnu: r-keggrest: Move to (gnu packages bioconductor).
From: |
guix-commits |
Subject: |
23/54: gnu: r-keggrest: Move to (gnu packages bioconductor). |
Date: |
Mon, 31 May 2021 10:03:10 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit d0a5503752cab62efbaa06bd00fb92145e015732
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri May 21 22:25:55 2021 +0200
gnu: r-keggrest: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-keggrest): Move from here...
* gnu/packages/bioconductor.scm (r-keggrest): ...to here.
---
gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++
gnu/packages/bioinformatics.scm | 26 --------------------------
2 files changed, 26 insertions(+), 26 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 25094e7..28e8810 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2839,6 +2839,32 @@ microarray data, using nearest neighbor averaging.")
Shiny-based display methods for Bioconductor objects.")
(license license:artistic2.0)))
+(define-public r-keggrest
+ (package
+ (name "r-keggrest")
+ (version "1.30.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "KEGGREST" version))
+ (sha256
+ (base32
+ "0k9z85xf9la2y98xqmdmjb8mci9fh2fdybkl77x1yl26hyalip0s"))))
+ (properties `((upstream-name . "KEGGREST")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biostrings" ,r-biostrings)
+ ("r-httr" ,r-httr)
+ ("r-png" ,r-png)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://bioconductor.org/packages/KEGGREST")
+ (synopsis "Client-side REST access to KEGG")
+ (description
+ "This package provides a package that provides a client interface to the
+@dfn{Kyoto Encyclopedia of Genes and Genomes} (KEGG) REST server.")
+ (license license:artistic2.0)))
+
(define-public r-limma
(package
(name "r-limma")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index df0d4e7..8188b50 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9168,32 +9168,6 @@ their variance is independent of the mean, and they are
usually more sensitive
and specific in detecting differential transcription.")
(license license:artistic2.0)))
-(define-public r-keggrest
- (package
- (name "r-keggrest")
- (version "1.30.1")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "KEGGREST" version))
- (sha256
- (base32
- "0k9z85xf9la2y98xqmdmjb8mci9fh2fdybkl77x1yl26hyalip0s"))))
- (properties `((upstream-name . "KEGGREST")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-biostrings" ,r-biostrings)
- ("r-httr" ,r-httr)
- ("r-png" ,r-png)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (home-page "https://bioconductor.org/packages/KEGGREST")
- (synopsis "Client-side REST access to KEGG")
- (description
- "This package provides a package that provides a client interface to the
-@dfn{Kyoto Encyclopedia of Genes and Genomes} (KEGG) REST server.")
- (license license:artistic2.0)))
-
(define-public r-gage
(package
(name "r-gage")
- 42/54: gnu: r-mutationalpatterns: Move to (gnu packages bioconductor)., (continued)
- 42/54: gnu: r-mutationalpatterns: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 46/54: gnu: r-rhdf5: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 48/54: gnu: r-copyhelper: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 51/54: gnu: r-phantompeakqualtools: Let-bind commit, set revision to 1., guix-commits, 2021/05/31
- 24/54: gnu: r-gage: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 26/54: gnu: r-genomicfiles: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 27/54: gnu: r-dirichletmultinomial: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 31/54: gnu: r-biovizbase: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 36/54: gnu: r-motifrg: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 39/54: gnu: r-rhtslib: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 23/54: gnu: r-keggrest: Move to (gnu packages bioconductor).,
guix-commits <=
- 30/54: gnu: r-vsn: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 35/54: gnu: r-sva: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 38/54: gnu: r-zlibbioc: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 41/54: gnu: r-rcas: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 44/54: gnu: r-rhdf5filters: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 47/54: gnu: r-chipseq: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 45/54: gnu: r-annotationfilter: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 49/54: gnu: r-copywriter: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 50/54: gnu: r-methylkit: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31
- 53/54: gnu: r-spp: Move to (gnu packages bioconductor)., guix-commits, 2021/05/31